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Jan-Marino Ramirez

Department of Organismal Biology and Anatomy
The University of Chicago
1020 East 57 th Street
Chicago, IL 60637

jramire@uchicago.edu

 

Expertise:
Patch clamping, Brain slice technique, Intracellular/extracellular recordings, neuronal network analysis

My laboratory focuses on the question how the brain controls rhythmic activity. This issue is of great basic scientific and clinical interest, because many mammalian neuronal networks generate rhythmic activity, including networks within the neocortex, basal ganglia, thalamus, locus coeruleus, the hypothalamus, ventral tegmentum area, hippocampus, amygdala, brainstem and spinal cord.

Throughout my research career I was interested in understanding the neuronal basis of rhythmic activity. As a graduate student and postdoctoral fellow I used invertebrate and vertebrate model systems to unravel the neuronal basis underlying rhythmic motor behaviors such as walking, flight and respiration. At the University of Chicago I characterize functional neuronal networks in functional brain slices to unravel more directly mechanisms of mammalian rhythm generation. My laboratory concentrates on three main projects.

(1) Brain slice techniques are used to unravel mechanisms underlying the reconfiguration of the respiratory network in response to aminergic and peptidergic neuromodulators as well as hypoxia.

(2) More recently, we began to study neocortical and hippocampal slices from mice to unravel rhythm generating mechanisms and neuromodulation associated with neocortical and hippocampal slow oscillations.

(3) In collaboration with the Department of Pediatrics we use the slice technique to investigate rhythm generating mechanisms underlying epilepsy in human cortex from children with intractable epilepsy.

(4) Recently we began to study burst generation and modulation in the Substantia nigra of mutant and wild type mice. This study relates to mechanisms that underlie tremor generation in Parkinson patients.

We established that the isolated respiratory network responds to hypoxia in a biphasic manner, an augmentation is followed by a depression and apnea. This response resembles qualitatively the hypoxic response of the deafferented, but otherwise intact respiratory network. Therefore the isolated respiratory network can be used as an interesting model system to address clinically relevant issues related to SIDS and other neurological disorders. Of basic scientific interest was the quantitative characterization of calcium currents in respiratory neurons. This study serves as an important basis for a series of studies elucidating the cellular mechanisms that lead to the hypoxic response. In a team effort involving all members of my laboratory we established a cascade of cellular events that can explain how hypoxia leads to an initial augmentation (hyperventilation), a secondary depression, apnea and the generation of gasping. We demonstrated that the pre-Bötzinger complex, is responsible for the generation of multiple respiratory states: eupnea, sighs and gasps. We have also shown that the Pre-Bötzinger complex is hypoxia-sensitive and that pacemaker neurons within this area exhibit a similar frequency response to hypoxia even when isolated from the respiratory network. The identification of these hypoxia-sensitive pacemaker neurons lead to a series of experiments that aim at unraveling the underlying hypoxia-sensitive cellular mechanisms. More recently we began to study how neuromodulators such as serotonin, substance P and norepinephrine reconfigures the respiratory network in order to generate different forms of respiratory patterns. The studies in the neocortex and the substantia nigra are conceptually similar and we examine how these networks reconfigure in response to hypoxia and/or aminergic and peptidergic neuromodulators.

Specific research projects:
-- Rhythm generation in the mammalian respiratory network

-- Rhythm generation and epilepsy in neocortical networks

-- Burst generation in Substantia nigra

Laboratory personnel:
Dr. Jean-Charles Viemari, Postdoctoral Research Associate
jcv@uchicago.edu

Dr. Andrew A. Hill, Research Assistant Professor, Department of Organismal Biology
Laavhill@yahoo.com

Dr. Atsushi Doi, Postdoctoral Research Associate
Doi@uchicago.edu

Michael Carroll, Graduate Student, Committee on Computational Neuroscience
msc@uchicago.edu

William A. Thistlethwaite, (MD/PhD) Graduate Student, Committee on Neurobiology
wthistle@uchicago.edu

Ana Mrejeru, Graduate Student, Committee on Neurobiology
ana1@uchicago.edu

 

© 2005Center for Integrative Neuroscience and Neuroengineering
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